PEMBANGUNAN PLATFORM DIGITAL AGRIGENOMIK (AgDP): PANGKALAN DATA BERASASKAN PENGETAHUAN SEBAGAI SOKONGAN PENYELIDIKAN DAN PEMBAIKBAKAAN DALAM PERTANIAN
DOI:
https://doi.org/10.53840/e-jpi.v13i3.439Keywords:
agrikultur, genomik, genetik, pangkalan data, pengurusan maklumatAbstract
Perkembangan pesat teknologi era pasca-genomik telah menghasilkan data genomik dan genetik pada skala besar, seterusnya mewujudkan keperluan mendesak terhadap sistem pengurusan data yang efisien, bersistematik dan mudah diakses. Di Institut Penyelidikan dan Kemajuan Pertanian Malaysia (MARDI), para penyelidik memerlukan capaian pantas bagi maklumat tersebut kerana digunakan untuk memacu penyelidikan pertanian khususnya dalam pembangunan penanda molekul, penyuntingan genom dan pembaikbakaan tanaman. Namun begitu, data dan maklumat tersebut sering bertaburan dalam pelbagai format dan terdapat di dalam pelbagai pangkalan data yang berasingan sehingga menjejaskan kecekapan pengurusan data serta menjejaskan sumber tenaga kerja yang optimum. Bagi menangani cabaran tersebut, tiga pangkalan data telah dibangunkan, iaitu MyRiceBase, PapayaNetBase dan CropGDB. Ketiga-tiga pangkalan data tersebut kemudiannya disepadukan dalam sebuah platform digital agrigenomik (AgDP). AgDP dibangunkan sebagai hab rujukan, direktori dan perkongsian maklumat untuk komuniti penyelidikan pertanian. Pembangunan AgDP adalah dengan menggunakan sistem pengurusan kandungan (CMS) WordPress serta sistem pengurusan pangkalan data (DBMS) MySQL. AgDP menyediakan akses berpusat terhadap pelbagai pangkalan data khusus, iaitu MyRiceBase yang mengandungi data genomik dan genetik padi tempatan, PapayaNetBase yang menyediakan data genomik dan genetik betik dan CropGDB yang menyimpan data genomik serta genetik tanaman tempatan seperti durian dan pisang. Setiap pangkalan data teras ini menyimpan dan mengurus data genomik serta genetik mengikut tanaman dan spesies masing-masing. Inisiatif ini membolehkan pengguna AgDP meneroka, mengakses serta merujuk maklumat berkaitan secara efisien tanpa perlu mencari secara berasingan merentas pelbagai sistem. Hasilnya, pelbagai kategori pengguna yang merangkumi penyelidik, pelajar dan peladang dapat memanfaatkan sumber maklumat tersebut secara efektif untuk pelbagai aplikasi kajian seperti pembangunan cap jari DNA, penyuntingan genom dan pembaikbakaan tanaman.
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